tahiri-lab / aPhyloGeo-pipeline Star 8 Code Issues Pull requests Phylogeographic workflow using sliding-windows, RAxML-NG and FastTree workflow phylogenetics phylogeography neighbor-joining raxml sliding-windows fasttree robinson-foulds Updated Apr 13, 2023 Python
ana-chenoweth / eco-phylo-insights Star 2 Code Issues Pull requests Phylogenetic Insights from Turtles, Lizards, Crocodiles and Birds Sequences. Jupyter Notebook with tree construction python birds jupyter-notebook least-squares neighbor-joining upgma jukes-cantor reptiles turtles quartet-distance crocodile robinson-foulds Updated Jun 26, 2025 Jupyter Notebook
tahiri-lab / PhyDBSCAN Star 2 Code Issues Pull requests phyDBSCAN: Building alternative phylogenetic trees using DBSCAN and Robinson and Foulds distance bioinformatics clustering classification dbscan phylogeny consensus-tree supertree robinson-foulds Updated Aug 4, 2025 C++
marcelcases / bioinformatics Star 0 Code Issues Pull requests Bioinfomatics lab sessions phylogenetic-trees local-search robinson-foulds clonal-deconvolution Updated Nov 13, 2021 Jupyter Notebook