Documentation: Sample linking in download/upload feature & SOP #70
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…e" for sample linking. * Better defined how to find sample id to use for linking samples in dynamic table
Adding link to "create samples in an study" section in user guide
…ttps://github.com/seek4science/seek-documentation into NielsGeudens-patch-download-upload-sample-linking
floradanna
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Nov 3, 2025
floradanna
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Nov 3, 2025
floradanna
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Nov 3, 2025
floradanna
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Nov 3, 2025
floradanna
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Nov 3, 2025
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I added few suggestions: I would keep the SOP page simple and general. ISA-JSON specific info related to SOP should not be included in the general SOP page, but in ISA-JSON specific pages, where necessary
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Hi Flora, |
PhilReedData
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Nov 4, 2025
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I've left some formatting and style comments, and one about navigation.
help/user-guide/sops.md
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| Standard Operating Procedures (SOPs), also known as Protocols, describe the steps required to reproduce an assay or part of an experimental workflow. | ||
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| SOPs can be uploaded in various formats (Word documents, PDFs, e-lab notebooks, code scripts, annotated spreadsheets, etc.) and stored as assets in SEEK. These assets can be linked to Assays (and in ISA-JSON compliant setups also to Studies) to document the procedures applied. |
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| SOPs can be uploaded in various formats (Word documents, PDFs, e-lab notebooks, code scripts, annotated spreadsheets, etc.) and stored as assets in SEEK. These assets can be linked to Assays (and in ISA-JSON compliant setups also to Studies) to document the procedures applied. | |
| SOPs can be uploaded in various formats (such as Word documents, PDFs, e-lab notebooks, code scripts, annotated spreadsheets) and stored as assets in {{ site.seek_instance.name | default: "FAIRDOM-SEEK" }}. These assets can be linked to Assays (and in ISA-JSON compliant setups also to Studies) to document the procedures applied. |
Avoiding Latin abbreviations. Adding the instance name field.
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Updated documentation on download/upload feature and its sample linkage
Updated documentation on SOPs
Closes #67
Closes #2334
Closes #2311