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ImageJ

Open source scientific multidimensional image processing
README.md

ImageJ is open source software for processing and analyzing scientific images.

ImageJ is the original desktop application which has been in development since 1997.

ImageJ2 is a new version of ImageJ targeting scientific multidimensional image data.

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  1. ImageJ ImageJ Public

    Public domain software for processing and analyzing scientific images

    Java 697 243

  2. imagej2 imagej2 Public

    Open scientific N-dimensional image processing 🔬 🎇

    Java 1.3k 344

  3. example-legacy-plugin example-legacy-plugin Public template

    Simple Maven project for an ImageJ 1.x plugin

    Java 34 42

  4. example-imagej2-command example-imagej2-command Public template

    Simple Maven project for an ImageJ2 command

    Java 33 20

  5. imagej.github.io imagej.github.io Public

    The ImageJ wiki

    JavaScript 28 156

  6. tutorials tutorials Public

    ImageJ2 programming examples

    Jupyter Notebook 192 117

Repositories

Showing 10 of 84 repositories
  • imagej.github.io Public

    The ImageJ wiki

    imagej/imagej.github.io’s past year of commit activity
    JavaScript 28 156 62 (1 issue needs help) 4 Updated Nov 4, 2025
  • list-of-update-sites Public

    The update sites ImageJ2 knows about automatically

    imagej/list-of-update-sites’s past year of commit activity
    Python 6 101 1 0 Updated Nov 3, 2025
  • pyimagej Public

    Use ImageJ from Python

    imagej/pyimagej’s past year of commit activity
    Python 523 93 51 4 Updated Oct 28, 2025
  • imagej-scripting Public

    ImageJ-specific applications of the SciJava script languages

    imagej/imagej-scripting’s past year of commit activity
    Python 27 15 7 0 Updated Oct 22, 2025
  • imagej-updater Public

    The automatic updater for ImageJ

    imagej/imagej-updater’s past year of commit activity
    Java 12 15 56 4 Updated Oct 14, 2025
  • ImageJ Public

    Public domain software for processing and analyzing scientific images

    imagej/ImageJ’s past year of commit activity
    Java 697 243 73 7 Updated Oct 9, 2025
  • imagej-tensorflow Public

    ImageJ/TensorFlow integration library

    imagej/imagej-tensorflow’s past year of commit activity
    Java 26 15 8 1 Updated Oct 1, 2025
  • napari-imagej Public

    Use ImageJ functionality from napari

    imagej/napari-imagej’s past year of commit activity
    Python 31 BSD-2-Clause 5 42 1 Updated Sep 23, 2025
  • imagej-legacy Public

    ImageJ+ImageJ2 compatibility layer

    imagej/imagej-legacy’s past year of commit activity
    Java 17 BSD-2-Clause 27 97 (1 issue needs help) 13 Updated Aug 27, 2025
  • imagej2 Public

    Open scientific N-dimensional image processing 🔬 🎇

    imagej/imagej2’s past year of commit activity
    Java 1,305 BSD-2-Clause 344 132 1 Updated Aug 12, 2025
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