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Pull requests: bgruening/galaxytools

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Pull requests list

Yolo training : Add the ability to choose your own model
#1706 opened Oct 30, 2025 by TuturBaba Loading…
2
Add credential support to chatgpt tool
#1702 opened Oct 29, 2025 by arash77 • Draft
add cellposeSAM (v4)
#1695 opened Oct 23, 2025 by sunyi000 Loading…
2
Coreutils sort - Add end column and character range functionality
#1694 opened Oct 22, 2025 by RZ9082 Loading…
4
fix: cellpose headless tool
#1692 opened Oct 22, 2025 by rmassei Loading…
1
3
Updating tools/image_processing/imagemagick from version 7.1.2-2 to 7.1.0.43
#1677 opened Sep 8, 2025 by gxydevbot Loading…
5
Updating tools/llm_hub from version 1.101.0 to 2.6.1
#1676 opened Sep 1, 2025 by gxydevbot Loading…
21
Updating tools/flexynesis from version 0.2.20 to 1.1.4
#1675 opened Sep 1, 2025 by gxydevbot Loading…
5
update rbpbench
#1658 opened Jul 17, 2025 by PlushZ Loading…
2
aggregated updates to gnu-coreutils
#1652 opened Jul 7, 2025 by nilchia Loading…
19
Updating tools/hictk from version 2.0.2 to 2.1.5
#1606 opened Apr 14, 2025 by gxydevbot Loading…
7
Fixed Tiara tool error in certain cases
#1595 opened Mar 18, 2025 by daduijker Loading…
10
lint fixes for flux and salmon
#1594 opened Mar 15, 2025 by bgruening • Draft
fix lint
#1590 opened Mar 8, 2025 by bgruening Loading…
Updating tools/bioimaging from version 2.4.1 to 2.6.0
#1578 opened Feb 17, 2025 by gxydevbot Loading…
1
tranfer group_humann2 tool
#1568 opened Jan 17, 2025 by bernt-matthias Loading…
5
Updating tools/chipseeker from version 1.32.0 to 1.42.0
#1564 opened Jan 6, 2025 by gxydevbot Loading…
Updating tools/canu from version 2.2 to 2.3
#1562 opened Dec 30, 2024 by gxydevbot Loading…
Add linter exceptions
#1561 opened Dec 14, 2024 by bernt-matthias Loading…
Add --local option to Bismark Bowtie2 Wrapper (continuation from PR #1537, part 2)
#1545 opened Nov 15, 2024 by jonasbucherETH Loading…
1
Updating tools/rna_tools/rbpbench from version 0.8.1 to 1.0.6
#1531 opened Oct 21, 2024 by gxydevbot Loading…
4
PTM Dephosphorylation Predictation Tool
#1525 opened Oct 16, 2024 by haibkhn Loading…
6
Tools/nextdenovo
#1515 opened Oct 7, 2024 by bgruening Loading…
Updating tools/agat from version 1.4.0 to 1.5.1
#1507 opened Sep 23, 2024 by gxydevbot Loading…
6
Updating chemicaltoolbox/im-pipelines from version 1.1.4 to 1.1.6
#1498 opened Sep 9, 2024 by gxydevbot Loading…
4
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